ORFeome > fmr1 – XORFeome 2.0

fmr1 – XORFeome 2.0

General Information

Species: Xenopus tropicalis fragile X mental retardation 1, mRNA (cDNA clone MGC:69519 IMAGE:5336511), complete cds
Gene Symbol: fmr1
Gene ID: 448049
ORF gb_acc: MG133343
ORF ID: 10845

ORF full-length analysis tests

Clone type: Putative Full Length
XGC accession: BC074570

Library Location

Plate ID: GDExt11008
Well Location: D12

EST Sequences

Clone: MGC:69519 IMAGE:5336511
Trimmed Sequence: ATGGAGGAGCTGGCCGTGGAGGTGCGGGGCTCCAATGGAGCCTTCTACAAGGCATTTGTGAAGGATGTACATGAGGATTCTATAACTGTCACTTTTGAAAACAACTGGCAGCAAGAGAGACAAATCCCATTCCATGATGTAAGATTTCCACCTCCATCAGGGTATAATAAGGATATAAATGAAAGTGATGAGGTAGAGGTGTATTCCAGAGCAAATGAAAAAGAGCCATGCTGCTGGTGGCTTGCTAAAGTTAGAATGATAAAGGGTGAGTTTTATGTTATAGAATATGCAGCTTGTGATGCAACTTACAATGAGATAGTCACTATAGAACGGCTGCGATCTGTTAATCCCAACAAGCCGGCAACAAAAAACTCATTTCACAAGGTTAAACTGGACGTTCCAGAAGATCTAAGGCAAATGTGTGCAAAAGATTCAGCGCATAAAGATTTTAAAAAGGCTGTTGGTGCATTTTCAGTATCGTACGATTCAGAAAACTACCAGCTTGTCATTCTGTCTGTTAATGAAGTAACTATAAAAAGGGCAAACATGCTGAGTGACATGCATTTCCGAAGCCTTCGTACCAAACTGTCACTTATGTTGAGAAATGAAGAAGCCAGCAAACAGCTTGAAAGTTCTAGGCAGTTGGCATCCAGATTTCATGAGCAGTTCATAGTACGAGAAGATCTGATGGGGCTTGCTATTGGTACTCATGGTGCCAACATACAGCAGGCTAGGAAGGTTCCTGGGGTAACTGCAATTGATCTTGATGAAGACACATGCACATTTCATATTTATGGAGAGGACCAAGAAGCTGTTAAGAAAGCCAGGACCTACCTGGAATTTGCAGAAGATGTTATACAAGTCCCACGGAATTTAGTAGGCAAAGTCATTGGGAAAAATGGAAAGCTCATTCAGGAAATTGTGGATAAATCTGGTGTTGTTCGAGTCCGAATTGAAGCAGAAAATGATAAGAATATTTCCCCGGAAGAGGGTATGGTTCCTTTTGTGTTTGTGGGGACAAAGGACAGCATCACCAATGCAACTGTTTTATTGGATTACCACCTTAATTATTTAAAGGAAGTGGACCAACTGCGCTTAGAACGGTTACAAATTGATGAGCAACTTCGACAAATTGGAGCTAGCTCAAGGCCTCCACCTAATCGGCCTGATAAGGAGAAGGGATATCAGAGTGAAGACCTTAGTGGCACTGGGAGAGGAAGCAGACCTTACAATAACAGAGGCCGCAGTCGAAGGGGCACAGGTTATGCCTCTGACATAAGGTATGGAGATCCAGATTACAGAAAGACCACTTATCCGGAATACCCCAGGTCCCAAGCATTCTGGATAAAAGGCACAAATTCAGAAGCATCAAATGCCTCAGAGACAGAATCAGACCACCGAGATGAGCTCAGTGATTGGTCATTGGCTCCAGCTGAGGATGACAGAGATAATTATCATCGAAGGGGGGATGGACGCAGACGAGGGGGACCTCGAGGTCAAGGCATGAGAGGTCGTGGAGGATTTAAAGGAAACGATGACCAACCACGACCGGACAACAGGCAACGCAATTCAAGGGAGACAAAAGCAAGGACATCAGATGGCTCTTTACAGATCCGTATTGACTGCAATAATGAAAGGAGTGTACATACTAAAACCCTGCAAAACGCATCTGTTGAAGGCAGCCGACTGCGCACTGGCAAAGACCGCGTTCAAAAGAAAGAGAAGAGCGAAGTGGTGGACGGACCACAAGTGGTGGTTAATGGCATACCATAA
Full Trace Sequence: cggttttaatgtttacattcgaggcggtgttggggattccttgccggacggggtcccgtttcgctttcatttcccgagagcaggagcagcggtggcgggcggcgggcctaatgctggctttggcacactgacagaaacgaggcctgggcggggggtgggagacccgccttatctgccgcccgtaaccaaggcatcgcgcggacccaacatggaggagctggccgtggaggtgcggggctccaatggagccttctacaaggcatttgtgaaggatgtacatgaggattctataactgtcacttttgaaaacaactggcagcaagagagacaaatcccattccatgatgtaagatttccacctccatcagggtataataaggatataaatgaaagtgatgaggtagaggtgtattccagagcaaatgaaaaagagccatgctgctggtggcttgctaaagttagaatgataaagggtgagttttatgttatagaatatgcagcttgtgatgcaacttacaatgagatagtcactatagaacggctgcgatctgttaatcccaacaagccggcaacaaaaaactcatttcacaaggttaaactggacgttccagaagatctaaggcaaatgtgtgcaaaagattcagcgcataaagattttaaaaaggctgttggtgcattttcagtatcgtacgattcagaaaactaccagcttgtcattctgtctgttaatgaagtaactataaaaagggcaaacatgctgagtgacatgcatttccgaagccttcgtaccaaactgtcacttatgttgagaaatgaagaagccagcaaacagcttgaaagttctaggcagttggcatccagatttcatgagcagttcatagtacgagaagatctgatggggcttgctattggtactcatggtgccaacatacagcaggctaggaaggttcctggggtaactgcaattgatcttgatgaagacacatgcacatttcatatttatggagaggaccaagaagctgttaagaaagccaggacctacctggaatttgcagaagatgttatacaagtcccacggaatttagtaggcaaagtcattgggaaaaatggaaagctcattcaggaaattgtggataaatctggtgttgttcgagtccgaattgaagcagaaaatgataagaatatttccccggaagagggtatggttccttttgtgtttgtggggacaaaggacagcatcaccaatgcaactgttttattggattaccaccttaattatttaaaggaagtggaccaactgcgcttagaacggttacaaattgatgagcaacttcgacaaattggagctagctcaaggcctccacctaatcggcctgataaggagaagggatatcagagtgaagaccttagtggcactgggagaggaagcagaccttacaataacagaggccgcagtcgaaggggcacaggttatgcctctgacataaggtatggagatccagattacagaaagaccacttatccggaataccccaggtcccaagcattctggataaaaggcacaaattcagaagcatcaaatgcctcagagacagaatcagaccaccgagatgagctcagtgattggtcattggctccagctgaggatgacagagataattatcatcgaaggggggatggacgcagacgagggggacctcgaggtcaaggcatgagaggtcgtggaggatttaaaggaaacgatgaccaaccacgaccggacaacaggcaacgcaattcaagggagacaaaagcaaggacatcagatggctctttacagatccgtattgactgcaataatgaaaggagtgtacatactaaaaccctgcaaaacgcatctgttgaaggcagccgactgcgcactggcaaagaccgcgttcaaaagaaagagaagagcgaagtggtggacggaccacaagtggtggttaatggcataccataaccctatatgttgcaaataaaccctacatagtgcaaacaaaataccaagaaatacaaaattctcatttcacaatagagaaacctgttaggccaaagacaaatgggcaagacaatgcagggcctacatgaattgctcctgttagccttattttgttagtgttggctgtaagcagttttcagaactcagacattggaaacctatttgcattcaatatcaaaaccttcgaggctttcaagtacatattgcacttgacttaaaaatttaaaaaagtattttttgtttaaaagaaaaaaaaataaattaaaaaaactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
Translation: MEELAVEVRGSNGAFYKAFVKDVHEDSITVTFENNWQQERQIPFHDVRFPPPSGYNKDINESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKNSFHKVKLDVPEDLRQMCAKDSAHKDFKKAVGAFSVSYDSENYQLVILSVNEVTIKRANMLSDMHFRSLRTKLSLMLRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIYGEDQEAVKKARTYLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENDKNISPEEGMVPFVFVGTKDSITNATVLLDYHLNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRPDKEKGYQSEDLSGTGRGSRPYNNRGRSRRGTGYASDIRYGDPDYRKTTYPEYPRSQAFWIKGTNSEASNASETESDHRDELSDWSLAPAEDDRDNYHRRGDGRRRGGPRGQGMRGRGGFKGNDDQPRPDNRQRNSRETKARTSDGSLQIRIDCNNERSVHTKTLQNASVEGSRLRTGKDRVQKKEKSEVVDGPQVVVNGIP
Donor tissue: tailbud