ORFeome > mmp1-prov ORF1 – XORFeome v1.0

mmp1-prov ORF1 – XORFeome v1.0

General Information

Species: Xla
Gene Symbol:
Gene ID: 6256570
Gene Page ID:
ORF Xenbase ID: 17284341

ORF full-length analysis tests

Full-Length confidence: high
Original XGC clone accession: BC054233
Original XGC clone length: 1401

Human orthology & disease relationships

NCBI Entrez ID:
Ensembl gene IDs:
Directly associated (OMIM) disease MIM numbers:
Indirectly associated (Lage, et al.) disease MIM numbers:

Library Location

Plate ID: GDExl11002
Well Location: H01

Sequences - 5ʹ (forward) EST

Accession: JZ839244
dbEST ID: 79656946
Trimmed Sequence: ATGAAGTCCTGGATTCTGTTGCTGCTGTGTATAGCATGTTGCACAGCATTCCCTGCTAGGATACAGACAGACATAGAAAAGAATGATGGGAAGGTTGCTGAGGAGTTCTTGAAGAAATACTTCAACCTTCAGACAGAAGGAGGCCGTCTGGCAAGAAAAAAGGGCAGCAATGCATTTTCAGAGAAAATCCGCGAGATGCAAGACTTCTATGGTTTGGAGGTCACTGGAACACTGGACGAAGAAACCTTAGAAGTGATGCAGCAACCTCGATGTGGTATTGCTGACGTGGCCAATTTCAGAGTTTTCCCTGGAAACCCCGTGTGGAACAAGAAAGACCTGACATACAGAATTCAGAACTATACCCCAGACATGACCAGAGATGAGGTGGACCGGGCCATTCAGAAGGCTTTCAAAGTCTGGAGTGATGTCACCCCTCTTACTTTCACTAGGGTCAATGATGGCGTCGCTGATATTGAGATCTCATTTGCAGCTCGAGATCATAAAGATTTTTATCCTTTTGATGGCCCATATGGTACCCTGGCACATGCATTTGCACCTGGAAATAACAATGGAGGGGACGCACATTTTGATGAAGATGAAAACTGGACAAGTGGATCATTTGGTTTCAACTTGTTCCTTGTGGCTGCTCATGAGTTTGGCCATTCCCTTGGGGCTCCACCATTCTAATGACCCTAAAGGCCCTAATGGTACCCAAACTACCATTTAAGGTCAATCCCCATAAAATACCAAGTTGGCCTTCGGGAAGGGACCTTTAAGGGGAATTCCCCGTCACCTGGTCACCGGGACCCAAGGGAACACAA
Full Trace Sequence: TCGGGGCCCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGAAGTCCTGGATTCTGTTGCTGCTGTGTATAGCATGTTGCACAGCATTCCCTGCTAGGATACAGACAGACATAGAAAAGAATGATGGGAAGGTTGCTGAGGAGTTCTTGAAGAAATACTTCAACCTTCAGACAGAAGGAGGCCGTCTGGCAAGAAAAAAGGGCAGCAATGCATTTTCAGAGAAAATCCGCGAGATGCAAGACTTCTATGGTTTGGAGGTCACTGGAACACTGGACGAAGAAACCTTAGAAGTGATGCAGCAACCTCGATGTGGTATTGCTGACGTGGCCAATTTCAGAGTTTTCCCTGGAAACCCCGTGTGGAACAAGAAAGACCTGACATACAGAATTCAGAACTATACCCCAGACATGACCAGAGATGAGGTGGACCGGGCCATTCAGAAGGCTTTCAAAGTCTGGAGTGATGTCACCCCTCTTACTTTCACTAGGGTCAATGATGGCGTCGCTGATATTGAGATCTCATTTGCAGCTCGAGATCATAAAGATTTTTATCCTTTTGATGGCCCATATGGTACCCTGGCACATGCATTTGCACCTGGAAATAACAATGGAGGGGACGCACATTTTGATGAAGATGAAAACTGGACAAGTGGATCATTTGGTTTCAACTTGTTCCTTGTGGCTGCTCATGAGTTTGGCCATTCCCTTGGGGCTCCACCATTCTAATGACCCTAAAGGCCCTAATGGTACCCAAACTACCATTTAAGGTCAATCCCCATAAAATACCAAGTTGGCCTTCGGGAAGGGACCTTTAAGGGGAATTCCCCGTCACCTGGTCACCGGGACCCAAGGGAACACAA
Primer Sequence: GGGGACAACTTTGTACAAAAAAGTTGGCACCATGAAGTCCTGGATTCTGTTG

Sequences - 3ʹ (reverse) EST

Accession: JZ839243
dbEST ID: 79656945
Trimmed Sequence: GCAGTTCAACCAACTGGTATACTTTAACAGACGCAAGACCCTCTTCTTTGCCATGCTGAATTCATACTGCCGATTGCCATTGAAGAAATAGAGCATTCCATTTGATTGGAAGACTGCTTGCACCTTGTTTCCAACGCCTGGGAAACCATTAATGATGCTGTGAGGAGAGTCCTTATCCATTCGTGATTTTGCTTCATCATAACTCCAATACTGATTTTTAACAAAGAAGTATGTTTTCCCTGTTTCTTCGACGTGAACAGCTGCATCGATTTTCTTCACAGACTGGGGAAATCCAAGTTGGTAGATGCTCTTAGGGAATCCCTTCTCAATGTCAAAGCCATTTAGAGCCCAGTATTTTGTTCCTTTAAATAAAAAAACTTGATCCTTTTCCTGATTTTCATAGGCTGCCTGAATTCCACTGGGAAGAGAACTCCAGAATGTCCTGATCTCATAATGCTCAATTTCTGATTTATTGGGGATCTTGCGCCAGAAGGATCTGTGTTTAAAGAACAACATTTCCCCACGCAGTGTTGTAATTGCATCAAATGTTATGTTTGGGGGGCAGTTTGTTGGGTTGCTTGGTGTTGATGGGTTCAGCAGGGTTTTTCCTTTGCTCCGTACAGTGACCGGATTCCATTAAGGTCATCCTGAAGGCAACTGGGTATGTAATTGGGAATGACTTAAAGGGTAATTTTGGGTTCATCAAGGGGCATTAAGGGTCATTAAAAAATGGGTAA
Full Trace Sequence: GCCGTGTAGCAGCTATGACCATGTAATACGACTCACTATAGGGGATATCAGCTGGATGGCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATAAGCAATGCTTTCTTATAATGCCAACTTTGTACAAGAAAGTTGGCAAGCAGTTCAACCAACTGGTATACTTTAACAGACGCAAGACCCTCTTCTTTGCCATGCTGAATTCATACTGCCGATTGCCATTGAAGAAATAGAGCATTCCATTTGATTGGAAGACTGCTTGCACCTTGTTTCCAACGCCTGGGAAACCATTAATGATGCTGTGAGGAGAGTCCTTATCCATTCGTGATTTTGCTTCATCATAACTCCAATACTGATTTTTAACAAAGAAGTATGTTTTCCCTGTTTCTTCGACGTGAACAGCTGCATCGATTTTCTTCACAGACTGGGGAAATCCAAGTTGGTAGATGCTCTTAGGGAATCCCTTCTCAATGTCAAAGCCATTTAGAGCCCAGTATTTTGTTCCTTTAAATAAAAAAACTTGATCCTTTTCCTGATTTTCATAGGCTGCCTGAATTCCACTGGGAAGAGAACTCCAGAATGTCCTGATCTCATAATGCTCAATTTCTGATTTATTGGGGATCTTGCGCCAGAAGGATCTGTGTTTAAAGAACAACATTTCCCCACGCAGTGTTGTAATTGCATCAAATGTTATGTTTGGGGGGCAGTTTGTTGGGTTGCTTGGTGTTGATGGGTTCAGCAGGGTTTTTCCTTTGCTCCGTACAGTGACCGGATTCCATTAAGGTCATCCTGAAGGCAACTGGGTATGTAATTGGGAATGACTTAAAGGGTAATTTTGGGTTCATCAAGGGGCATTAAGGGTCATTAAAAAATGGGTAA
Primer Sequence: GGGGACAACTTTGTACAAGAAAGTTGGCAAGCAGTTCAACCAACTGGTA