ORFeome > mmp2 ORF2 – XORFeome v1.0

mmp2 ORF2 – XORFeome v1.0

General Information

Species: Xla
Gene Symbol: mmp2
Gene ID: 482845
Gene Page ID: 482840
ORF Xenbase ID: 17284371

ORF full-length analysis tests

Full-Length confidence: high
Original XGC clone accession: BC099241
Original XGC clone length: 672

Human orthology & disease relationships

NCBI Entrez ID: 4313
Ensembl gene IDs: ENSG00000087245
Directly associated (OMIM) disease MIM numbers: 259600
Indirectly associated (Lage, et al.) disease MIM numbers:

Library Location

Plate ID: GDExl11006
Well Location: A10

Sequences - 5ʹ (forward) EST

Accession: JZ840174
dbEST ID: 79657876
Trimmed Sequence: ATGCGGACAATTAAAATTATTAACGTTTTAGTACTCATTTTCAATAGTTTTAGTATATTTTATTATGTTTCCCCTGCTCCATCTCCTATCATAAAGTTTCCAGGAGACAAATCTCCAAAGACAGACGTGGAACTTGCTGCGCAATACCTGAATCAGTTTTATGGCTGCCCTAAGGAAAAATGTCACCTGATGGTTCTTAAGGATGCCCTAAAGAAAATGCAAAGTTTTTTTGGTCTTCCTGAAACTGGGGAGTTTGATCAAAATACCATTGAAACCATGAAAAAGCCAAGATGTGGGAACCCCGATGTAGCCAACTATAATTTCTTTCCCAGGAAACCGAAATGGGACAAAAACCATCTGACATACAGGATTCTTGGTTATACAACAGATCTGGATTCTGAAACAGTTGATGATGCTTTTGCACGTGCTTTTAAAGTTTGGAGTGATGTCACACCATTGGAATTTAACAGAATTCATGATGGAGAAGCAGATATCATGATCAATTTTGGACGATGGGAACATGGTGTACCAGATAATTTAGATGCTGTTCTAGATCAAACCGGAAGTGGCTACAGCTACTTTTTCAAAGACTGGTATTACTTTCAAGTTGAAGACAAAAGTGTGAAGATTGTAAAGGTTGGCAATGTTCAAAATGACTGGCTACGCTGCTT
Full Trace Sequence: TCGAGGGCCCAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGCGGACAATTAAAATTATTAACGTTTTAGTACTCATTTTCAATAGTTTTAGTATATTTTATTATGTTTCCCCTGCTCCATCTCCTATCATAAAGTTTCCAGGAGACAAATCTCCAAAGACAGACGTGGAACTTGCTGCGCAATACCTGAATCAGTTTTATGGCTGCCCTAAGGAAAAATGTCACCTGATGGTTCTTAAGGATGCCCTAAAGAAAATGCAAAGTTTTTTTGGTCTTCCTGAAACTGGGGAGTTTGATCAAAATACCATTGAAACCATGAAAAAGCCAAGATGTGGGAACCCCGATGTAGCCAACTATAATTTCTTTCCCAGGAAACCGAAATGGGACAAAAACCATCTGACATACAGGATTCTTGGTTATACAACAGATCTGGATTCTGAAACAGTTGATGATGCTTTTGCACGTGCTTTTAAAGTTTGGAGTGATGTCACACCATTGGAATTTAACAGAATTCATGATGGAGAAGCAGATATCATGATCAATTTTGGACGATGGGAACATGGTGTACCAGATAATTTAGATGCTGTTCTAGATCAAACCGGAAGTGGCTACAGCTACTTTTTCAAAGACTGGTATTACTTTCAAGTTGAAGACAAAAGTGTGAAGATTGTAAAGGTTGGCAATGTTCAAAATGACTGGCTACGCTGCTTGCCAACTTTCTTGTACAAATTTGGCTTTATAAAAAAACTTTGCTTATCCATTTGTTTGCACCGAACGGGTCCACTTTAATTCAAAATAAAATCATTAATTTGGCGTCCCCGGCTGGAAA
Primer Sequence: GGGGACAACTTTGTACAAAAAAGTTGGCACCATGCGGACAATTAAAATTATTAAC

Sequences - 3ʹ (reverse) EST

Accession: JZ840173
dbEST ID: 79657875
Trimmed Sequence: GCAGCGTAGCCAGTCATTTTTGACATTGCCAACCTTTACAATCTTCACACTTTTGTCTTCAACTTGAAAGTAATACCAGTCTTTGAAAAAGTAGCTGTAGCCACTTCCGGTTTGATCTAGAACAGCATCTAAATTATCTGGTACACCATGTTCCCATCGTCCAAAATTGATCATGATATCTGCTTCTCCATCATGAATTCTGTTAAATTCCAATGGTGTGACATCACTCCAAACTTTAAAAGCACGTGCAAAAGCATCATCAACTGTTTCAGAATCCAGATCTGTTGTATAACCAAGAATCCTGTATGTCAGATGGTTTTTGTCCCATTTCGGTTTCCTGGGAAAGAAATTATAGTTGGCTACATCGGGGTTCCCACATCTTGGCTTTTTCATGGTTTCAATGGTATTTTGATCAAACTCCCCAGTTTCAGGAAGACCAAAAAAACTTTGCATTTTCTTTAGGGCATCCTTAAGAACCATCAGGTGACATTTTTCCTTAGGGCAGCCATAAAACTGATTCAGGTATTGCGCAGCAAGTTCCACGTCTGTCTTTGGAGAATTGTCTCCGGGAAACTTTAATTATAGGAGATGGAGCAGGGGAAACATAATAAAATATACTAAAACTATTGAAAATGAGTAATAAAAACTTTATAAATTTTAATTGTCCGCATGGGGGCCAACTTTTTGTGTACGAAGTTGGCATTAATAAAAAAACATTGGCTCAAACATTTTTGTTTGCACGCAAACAGGGTTCACAAACCAAAAAAAAAAAAAA
Full Trace Sequence: GAGGGGATCAGCTATGACCATGTAATACGACTCACTATAGGGGATATCAGCTGGGATGGCAAATAATGATTTTATTTTGACTGATANTGACCTGTTCGTTGCAACAAATTGATAAGCAATGCTTTCTTATAATGCCAACTTTGTACAAGAAAGTTGGCAAGCAGCGTAGCCAGTCATTTTTGACATTGCCAACCTTTACAATCTTCACACTTTTGTCTTCAACTTGAAAGTAATACCAGTCTTTGAAAAAGTAGCTGTAGCCACTTCCGGTTTGATCTAGAACAGCATCTAAATTATCTGGTACACCATGTTCCCATCGTCCAAAATTGATCATGATATCTGCTTCTCCATCATGAATTCTGTTAAATTCCAATGGTGTGACATCACTCCAAACTTTAAAAGCACGTGCAAAAGCATCATCAACTGTTTCAGAATCCAGATCTGTTGTATAACCAAGAATCCTGTATGTCAGATGGTTTTTGTCCCATTTCGGTTTCCTGGGAAAGAAATTATAGTTGGCTACATCGGGGTTCCCACATCTTGGCTTTTTCATGGTTTCAATGGTATTTTGATCAAACTCCCCAGTTTCAGGAAGACCAAAAAAACTTTGCATTTTCTTTAGGGCATCCTTAAGAACCATCAGGTGACATTTTTCCTTAGGGCAGCCATAAAACTGATTCAGGTATTGCGCAGCAAGTTCCACGTCTGTCTTTGGAGAATTGTCTCCGGGAAACTTTAATTATAGGAGATGGAGCAGGGGAAACATAATAAAATATACTAAAACTATTGAAAATGAGTAATAAAAACTTTATAAATTTTAATTGTCCGCATGGGGGCCAACTTTTTGTGTACGAAGTTGGCATTAATAAAAAAACATTGGCTCAAACATTTTTGTTTGCACGCAAACAGGGTTCACAAACCAAAAAAAAAAAAAA
Primer Sequence: GGGGACAACTTTGTACAAGAAAGTTGGCAAGCAGCGTAGCCAGTCATT