ORFeome > spcs2 ORF1 – XORFeome v1.0

spcs2 ORF1 – XORFeome v1.0

General Information

Species: Xl
Gene Symbol: spcs2
Gene ID: 5826529
Gene Page ID: 5826458
ORF Xenbase ID: 17298357

ORF full-length analysis tests

Full-Length confidence: high
Original XGC clone accession: BC141733
Original XGC clone length: 615

Human orthology & disease relationships

NCBI Entrez ID: 9789
Ensembl gene IDs: ENSG00000118363
Directly associated (OMIM) disease MIM numbers:
Indirectly associated (Lage, et al.) disease MIM numbers: 248900,608611

Library Location

Plate ID: GDExl11092
Well Location: A03

Sequences - 5ʹ (forward) EST

Accession: JZ838892
dbEST ID: 79656594
Trimmed Sequence: ATGGCGGCGAGAGGCGGAAAGAACGGGCTGCTGGAGAAAGTAAGCGAGTGGAAGATTGATGATAAACCAGTAAAGATTGACAAATGGGACGGATCTGCCGTGAAAAACTCCCTGGATGATGCAGCCAAAAAGGTTCTACTGGAGAAATACAGATATGTGGAAAACTTCTGTCTGATCGACGGCCGACTCATTATCTGCACCATCTCCTGCGTCTTTGCTATTGTGGCCCTCGTGTGGGACTATTTGCACCCCTTCCCCGAATCTAAACCTGTTCTGGCCTTCTGTGTCATATCGTATTTCCTGATGATGGGAATCCTGACTGTCTATACCTCGTATAAGGAGAAGAGTATATTCCTGGTGGCTCACAGAAAGGATCCCGCAGGAATGGACCCTGACGATATTTGGCATCTCTCCTCCAGCCTCAAACGGTTTGATGACAAGTACACGCTGAAGGTCACATACATCAACGGAAAAACCAGGGCCTATCGGGATGCGGAATTCACCAAATCCATTGCCAGATTCTTTGATAATAACGGCACGTTAGTGATGGACTTTTTTGAGCGCGAAGTCTCCAAGCCTCCTGACAGTTTTGGCCGGGGAGAAGAAGAACAAATT
Full Trace Sequence: GGGGCTCTAGTCGGGCCCAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGGCGGCGAGAGGCGGAAAGAACGGGCTGCTGGAGAAAGTAAGCGAGTGGAAGATTGATGATAAACCAGTAAAGATTGACAAATGGGACGGATCTGCCGTGAAAAACTCCCTGGATGATGCAGCCAAAAAGGTTCTACTGGAGAAATACAGATATGTGGAAAACTTCTGTCTGATCGACGGCCGACTCATTATCTGCACCATCTCCTGCGTCTTTGCTATTGTGGCCCTCGTGTGGGACTATTTGCACCCCTTCCCCGAATCTAAACCTGTTCTGGCCTTCTGTGTCATATCGTATTTCCTGATGATGGGAATCCTGACTGTCTATACCTCGTATAAGGAGAAGAGTATATTCCTGGTGGCTCACAGAAAGGATCCCGCAGGAATGGACCCTGACGATATTTGGCATCTCTCCTCCAGCCTCAAACGGTTTGATGACAAGTACACGCTGAAGGTCACATACATCAACGGAAAAACCAGGGCCTATCGGGATGCGGAATTCACCAAATCCATTGCCAGATTCTTTGATAATAACGGCACGTTAGTGATGGACTTTTTTGAGCGCGAAGTCTCCAAGCCTCCTGACAGTTTTGGCCGGGGAGAAGAAGAACAAATTGCCAACTTTCTTGTACAAGGTTTGCAATTTATAGAAAACAATGCTTATCAATTTTGTTGCACCGAACGGGGTGATTATCAGTTCAAAATAAAATCATTATTTGCCCTCCGGGGGAAATTCCCCCCTTAAAAAAAAAAAAAAAAAAAAAAAAAATTCTGTTTCACTTGCGTACTTCACCGGGGCGAAAAATACCAAATCTTTTTCTCT
Primer Sequence: GGGGACAACTTTGTACAAAAAAGTTGGCACCATGGCGGCGAGAGGCGGA

Sequences - 3ʹ (reverse) EST

Accession: JZ838891
dbEST ID: 79656593
Trimmed Sequence: TTTTGTCTTCTTCTCCATGGCCAAACTGTCATGGAGCTTGGAGACTTCTGGCTCAAACAAGTCCATCACTAACGTGCCGTTATTATCAAAGAATCTGGCAATGGATTTGGTGAATTCCGCATCCCGATAGGCCCTGGTTTTTCCGTTGATGTATGTGACCTTCAGCGTGTACTTGTCATCAAACCGTTTGAGGCTGGAGGAGAGATGCCAAATATCGTCAGGGTCCATTCCTGCGGGATCCTTTCTGTGAGCCACCAGGAATATACTCTTCTCCTTATACGAGGTATAGACAGTCAGGATTCCCATCATCAGGAAATACGATATGACACAGAAGGCCAGAACAGGTTTAGATTCGGGGAAGGGGTGCAAATAGTCCCACACGAGGGCCACAATAGCAAAGACGCAGGAGATGGTGCAGATAATGAGTCGGCCGTCGATCAGACAGAAGTTTTCCACATATCTGTATTTCTCCAGTAGAACCTTTTTGGCTGCATCATCCAGGGAGTTTTTCACGGCAGATCCGTCCCATTTGTCAATCTTTACTGGTTTATCATCAATCTTCCACTCGCCTACTTTCCCCCGCAGCCCGGTTCTTTCGCCTCTCCCCCCCCAGGGGCCAACCTTTTTTGTACAAAATTTGGAATAATAAAAAAACATTTGCTCATCAATTTTTTGCCAACCAAACCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATAATCCCCAAACCTTAAAAAACGCCGCCGCGCCATTAAAAA
Full Trace Sequence: GAAACGGCTATTGACCATGTAATACGACTCACTATAGGGGGATATCAGCTGGGATGGCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATAAGCAATGCTTTCTTATAATGCCAACTTTGTACAAGAAAGTTGGCAATTTTGTCTTCTTCTCCATGGCCAAACTGTCATGGAGCTTGGAGACTTCTGGCTCAAACAAGTCCATCACTAACGTGCCGTTATTATCAAAGAATCTGGCAATGGATTTGGTGAATTCCGCATCCCGATAGGCCCTGGTTTTTCCGTTGATGTATGTGACCTTCAGCGTGTACTTGTCATCAAACCGTTTGAGGCTGGAGGAGAGATGCCAAATATCGTCAGGGTCCATTCCTGCGGGATCCTTTCTGTGAGCCACCAGGAATATACTCTTCTCCTTATACGAGGTATAGACAGTCAGGATTCCCATCATCAGGAAATACGATATGACACAGAAGGCCAGAACAGGTTTAGATTCGGGGAAGGGGTGCAAATAGTCCCACACGAGGGCCACAATAGCAAAGACGCAGGAGATGGTGCAGATAATGAGTCGGCCGTCGATCAGACAGAAGTTTTCCACATATCTGTATTTCTCCAGTAGAACCTTTTTGGCTGCATCATCCAGGGAGTTTTTCACGGCAGATCCGTCCCATTTGTCAATCTTTACTGGTTTATCATCAATCTTCCACTCGCCTACTTTCCCCCGCAGCCCGGTTCTTTCGCCTCTCCCCCCCCAGGGGCCAACCTTTTTTGTACAAAATTTGGAATAATAAAAAAACATTTGCTCATCAATTTTTTGCCAACCAAACCAGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTATAATCCCCAAACCTTAAAAAACGCCGCCGCGCCATTAAAAA
Primer Sequence: GGGGACAACTTTGTACAAGAAAGTTGGCAATTTTGTCTTCTTCTCCATGGC