ORFeome > ssr1 ORF1 – XORFeome v1.0
ssr1 ORF1 – XORFeome v1.0
General Information
| Species: |
Xla |
| Gene Symbol: |
ssr1 |
| Gene ID: |
492170 |
| Gene Page ID: |
492165 |
| ORF Xenbase ID: |
17298855 |
ORF full-length analysis tests
| Full-Length confidence: |
high |
| Original XGC clone accession: |
BC056853 |
| Original XGC clone length: |
861 |
Human orthology & disease relationships
| NCBI Entrez ID: |
|
| Ensembl gene IDs: |
|
| Directly associated (OMIM) disease MIM numbers: |
|
| Indirectly associated (Lage, et al.) disease MIM numbers: |
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Library Location
| Plate ID: |
GDExl11003 |
| Well Location: |
C08 |
Sequences - 5ʹ (forward) EST
| Accession: |
JZ839539 |
| dbEST ID: |
79657241 |
| Trimmed Sequence: |
ATGACCCCCCTCCGTAATCTGTTCCTGCTCGTCCTCCTGGCCTTCCCGATCACGCTCATCGGCAACAGCAAAGGTCCTCTAGTTGCTGCCCAAGATGCCACGGAAGATGAAGAGGCAATTGATGATTCTGTAGTAGAGGAGGATGATGATGAAGCTGAAGTTGAGGAGGATGATACAACAGACCTGACAGAAGAAAAAGAGGAAGAGGAAGACTTAAGTTCTGGAGAGCCCAAAGCTTCCCCCAATGCTGATACCACTATTCTTTTTGTAAAAGGCGAAGATTTCCCAGCAAATGATATTGTTAAGTTCTTGGTGGGCTTTACCAACAAGGGGCCTGAAAACTTCATCGTTGAATCACTGGATGCCTCATTCAGATACCCTCAGGACTACCAGTTCTACATTCAGAATTTTACAGCTCTGCCTTTAAACACGGTTGTCCCCCCACAAAAACAGGCCACATTTGAGTATTCCTTCATTCCTGCTGAGCCCATGGGAGGACGTCCTTTTGGACTTGTCATCAATTTGAACTATAAAGACGCANATGGAAATGCTTTCCAAGATGCTGTCTTCAATCAGACAGTTACTATCATTGAGAAAGAGGATGGTCTGGATGGAGAAACGATATTCATGTACATNGTTCCTTGGTGGGNCTGGGATTGCTTGGTGATTGTTGGGTCTGCATCAGCTGCTTGGATCCAGAAAGAGAAAAAGACAAGCTCAAAAAAGTGGAAAATGGGCACTTTCTACCCAAAATGAATGTGGAAAATGAAGTTTGGAATTCCCCCTGTGAAACTTTTAAACCCAAATCAATAAAGGGCTTTCCCCAAAGAA |
| Full Trace Sequence: |
GGGGGGCCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATGAGCAATGCTTTTTTATAATGCCAACTTTGTACAAAAAAGTTGGCACCATGACCCCCCTCCGTAATCTGTTCCTGCTCGTCCTCCTGGCCTTCCCGATCACGCTCATCGGCAACAGCAAAGGTCCTCTAGTTGCTGCCCAAGATGCCACGGAAGATGAAGAGGCAATTGATGATTCTGTAGTAGAGGAGGATGATGATGAAGCTGAAGTTGAGGAGGATGATACAACAGACCTGACAGAAGAAAAAGAGGAAGAGGAAGACTTAAGTTCTGGAGAGCCCAAAGCTTCCCCCAATGCTGATACCACTATTCTTTTTGTAAAAGGCGAAGATTTCCCAGCAAATGATATTGTTAAGTTCTTGGTGGGCTTTACCAACAAGGGGCCTGAAAACTTCATCGTTGAATCACTGGATGCCTCATTCAGATACCCTCAGGACTACCAGTTCTACATTCAGAATTTTACAGCTCTGCCTTTAAACACGGTTGTCCCCCCACAAAAACAGGCCACATTTGAGTATTCCTTCATTCCTGCTGAGCCCATGGGAGGACGTCCTTTTGGACTTGTCATCAATTTGAACTATAAAGACGCANATGGAAATGCTTTCCAAGATGCTGTCTTCAATCAGACAGTTACTATCATTGAGAAAGAGGATGGTCTGGATGGAGAAACGATATTCATGTACATNGTTCCTTGGTGGGNCTGGGATTGCTTGGTGATTGTTGGGTCTGCATCAGCTGCTTGGATCCAGAAAGAGAAAAAGACAAGCTCAAAAAAGTGGAAAATGGGCACTTTCTACCCAAAATGAATGTGGAAAATGAAGTTTGGAATTCCCCCTGTGAAACTTTTAAACCCAAATCAATAAAGGGCTTTCCCCAAAGAA |
| Primer Sequence: |
GGGGACAACTTTGTACAAAAAAGTTGGCACCATGACCCCCCTCCGTAA |
Sequences - 3ʹ (reverse) EST
| Accession: |
JZ839538 |
| dbEST ID: |
79657240 |
| Trimmed Sequence: |
TTCATCGGATCCTGCCGGTCTTTTGGGGCCTCGCTTGCGGGGAGATCTTCTTGGGGAAGCCTTATTGATCTGGCTTAAAGTCTCAGGGGGAATCCAACTCATATCCACATCATTTTGGTTAGAAGTGCCCATCTCCACTTTCTGAGCTGGTCTTTTTCTCTTTCTGGATTCCAGCAGCTGATGCAGACCAACAATCACAAGCAATCCAAGCCCACCAAGGAACATGTACATGAATATCGTTTCTCCATCCAGACCATCCTCCTTCTCAATGATAGTAACTGTCTGATTGAAGACAGCATCTTGGAAAGCATTTCCATTTGCGTCTTTATAGTTCAAATTGATGACAAGTCCAAAAGGACGTCCTCCCATGGGCTCAGCAGGAATGAAGGAATACTCAAATGTGGCCTGTTTTTGTGGGGGGACAACCGTGTTTAAAGGCAGAGCTGTAAAATTCTGAATGTAGAACTGGTAGTCCTGAGGGTATCTGAATGAGGCATCCAGTGATTCAACGATGAAGTTTTCAGGCCCCTGGTTGGTAAAGCCCACCAAGAACTTAGCAATATCATTTGCTGGGAAATCTCACCTTTTTACATAAAGAAGAGGGTATCCGCCTTGGGGGGAAGCTTGGGGCTCTTCCGGAGCTAAGTCATCCTCCTCCCCCTTTTTTCTCCGTTCGGGGTCGGTGGTAGGCGTCCTCCGTAAACTTTAGGCTTCATCAATTCATTCTCTCTTGGACAAACCAAAATCAATCAATTGTGGCGATCCTTTAAT |
| Full Trace Sequence: |
GAAACGGCTATTGACCATGTAATACGACTCACTATAGGGGGATATCAGCTGGGATGGCAAATAATGATTTTATTTTGACTGATAGTGACCTGTTCGTTGCAACAAATTGATAAGCAATGCTTTCTTATAATGCCAACTTTGTACAAGAAAGTTGGCAATTCATCGGATCCTGCCGGTCTTTTGGGGCCTCGCTTGCGGGGAGATCTTCTTGGGGAAGCCTTATTGATCTGGCTTAAAGTCTCAGGGGGAATCCAACTCATATCCACATCATTTTGGTTAGAAGTGCCCATCTCCACTTTCTGAGCTGGTCTTTTTCTCTTTCTGGATTCCAGCAGCTGATGCAGACCAACAATCACAAGCAATCCAAGCCCACCAAGGAACATGTACATGAATATCGTTTCTCCATCCAGACCATCCTCCTTCTCAATGATAGTAACTGTCTGATTGAAGACAGCATCTTGGAAAGCATTTCCATTTGCGTCTTTATAGTTCAAATTGATGACAAGTCCAAAAGGACGTCCTCCCATGGGCTCAGCAGGAATGAAGGAATACTCAAATGTGGCCTGTTTTTGTGGGGGGACAACCGTGTTTAAAGGCAGAGCTGTAAAATTCTGAATGTAGAACTGGTAGTCCTGAGGGTATCTGAATGAGGCATCCAGTGATTCAACGATGAAGTTTTCAGGCCCCTGGTTGGTAAAGCCCACCAAGAACTTAGCAATATCATTTGCTGGGAAATCTCACCTTTTTACATAAAGAAGAGGGTATCCGCCTTGGGGGGAAGCTTGGGGCTCTTCCGGAGCTAAGTCATCCTCCTCCCCCTTTTTTCTCCGTTCGGGGTCGGTGGTAGGCGTCCTCCGTAAACTTTAGGCTTCATCAATTCATTCTCTCTTGGACAAACCAAAATCAATCAATTGTGGCGATCCTTTAAT |
| Primer Sequence: |
GGGGACAACTTTGTACAAGAAAGTTGGCAATTCATCGGATCCTGCCGGT |
